If you use embedded libraries, then since Automaton is one of the first addons to load (they go alphabetically) its copies of libraries load first and get used, so any other addon that uses the same libraries will artificially bulk up Automaton's numbers. With embedded libraries, you simply cannot get accurate performance data. Either run standalone libraries or don't worry about it.
There really should to be a sticky with this sort of info (not that anyone will read it). Now that 2.1 tracks addon memory usage, it comes up multiple times a day. :P